"A remarkable international effort to map out the avian tree of life has revealed how birds evolved after the mass extinction that wiped out the dinosaurs into more than 10,000 species alive today. More than 200 scientists in 20 countries joined forces to create the evolutionary tree, which reveals how birds gained their colourful feathers, lost their teeth, and learned to sing songs." Via iO9.
"No one really wants to admit I exist," says co-discoverer of the DNA molecule, James Watson, who after years of shunning over controversial statements is auctioning his 1962 Nobel Prize medal this Thursday to help pay bills and buy some artwork. Online bidding is an option.
The harsh environments of our neighboring planets will require proper attire, with 3D-printed, biological fashions that, in the words of the designer Neri Oxman, "blur the boundary between the environment and ourselves." Oxman's other recent work explores similar lines of utility with her organic, post-industrial aesthetic: some of it disturbing and some sublime.
"The patient tested negative for HIV, tuberculosis, lime disease, syphilis, coccidioides, histoplasma and cryptococcus." After four years of MRIs, a person's mysterious headaches, seizures and altered sense of smell and memory are diagnosed as a tapeworm growing throughout his brain.
I waited silently for her to explain that the female pelvis is shaped slightly differently from the male’s, with a larger opening for childbearing. That part was the giveaway. The real purpose of the exercise was to make her prove her conjecture with measurements--to translate the theory to practice. I also wanted her to explain why this sexual dimorphism--that is, this sexually determined physical difference--is not nearly so pronounced in nonhuman primates, such as chimpanzees.When teacher Robert S. Root-Bernstein got this answer to his question on how you should distinguish between male and female skeletons, he had to find a way to make her realise her error without disparaging her religion.
She spoke: Males have one fewer pair of ribs than females.
A genet in Hluhluwe-iMfolozi Park in South Africa has been photographed by camera traps for several weeks running, riding around on the backs of cape buffalo and rhinoceros . Researchers agree: this is weird! (via.) [more inside]
Whale.fm is a project (which you can contribute to!) to help "marine researchers understand what whales are saying." - really it's a project looking at the effects that manmade sound has on marine life, but what whales are communicating with their songs is still a really interesting question, so I've listed some relevant links in extended description. [more inside]
V Martineau Illustration: The Miracle of Trees, Sciencia Illustrations, Levels Of Complexity, Plants, The Paper Birch Tree, Why The Sky Is Far Away [more inside]
You invest so much in it, don't you? It's what elevates you above the beasts of the field, it's what makes you special. Homo sapiens, you call yourself. Wise Man. Do you even know what it is, this consciousness you cite in your own exaltation? Do you even know what it's for?Dr. Peter Watts is no stranger to MetaFilter. But look past his sardonic nuptials, heartbreaking eulogies, and agonizing run-ins with fascists (and fasciitis) and you'll find one of the most brilliant, compelling, and disquieting science fiction authors at work today. A marine biologist skilled at deep background research, his acclaimed 2006 novel Blindsight [full text] -- a cerebral "first contact" tale led by a diverse crew of bleeding-edge post-humans -- is diamond-hard and deeply horrifying, wringing profound existential dread from such abstruse concepts as the Chinese Room, the Philosophical Zombie, Chernoff faces, and the myriad quirks and blind spots that haunt the human mind. But Blindsight's last, shattering insight is not the end of the story -- along with crew/ship/"Firefall" notes, a blackly funny in-universe lecture on resurrecting sociopathic vampirism (PDF - prev.), and a rigorously-cited (and spoiler-laden) reference section, tomorrow will see the release of
Koryos, who previously explained how cats got domesticated using tumblr, now explains why homosexual pair-bonding can be a successful reproductive stratagem. Also, Coot Parenting Tips, Queen Cowbird Of The Brood Parasites , There's No Such Thing As An Alpha Wolf, and Can Animals Have Pets?
"The mammal mother works hard to stop her children from taking more than she is willing to give. The children fight back with manipulation, blackmail and violence. Their ferocity is nowhere more evident than in the womb [...] Pregnancy is a lot more like war than we might care to admit."
"... a series of curated, open access books about life — with life understood both philosophically and biologically — which provide a bridge between the humanities and the sciences." Although they offer "frozen PDFs," these books—on topics like biosemiotics, animal experience, and air—are curated collections of links to open access science articles, reviews, interviews, podcasts, sometimes with embedded sounds and videos. They have ISBN numbers and editors vetted by the Open Humanities Press, which is generally a gold mine of interesting books and journals. They feel perfectly at home on the open internet, evoking hope and nostalgia for a flourishing academic world wide web, without paywalls and login screens. [more inside]
Norbert Wiener: The Eccentric Genius Whose Time May Have Finally Come (Again) - "The most direct reason for Wiener's fall to relative obscurity was the breakthrough of a young mathematician and engineer named Claude Shannon." [more inside]
"Peter and Rosemary Grant are members of a very small scientific tribe: people who have seen evolution happen right before their eyes."
Linda Gormezano, a researcher with the American Museum of Natural History, studies polar bear ecology by collecting and analyzing polar bear feces. "One thing I didn’t mention is I don’t find the scat, my dog Quinoa finds it." via.
Clones Are People Too: The Science and Science Fiction of BBC America’s Orphan Black. BBC America's science fiction series Orphan Black has returned for a second season, with Tatiana Maslany reprising her extraordinary performance playing half a dozen different clone characters. Meanwhile, in the real world, scientists have created cloned embryonic stem cells from the DNA of two adult humans. [Previously]
UN Climate Report: We Must Focus On 'Decarbonization', and It Won't Wreck the Economy - "The basic message is simple: We share a planet. Let's start acting like it." [more inside]
Four women have had new vaginas grown in the laboratory and implanted by doctors in the US. "A tissue sample and a biodegradable scaffold were used to grow vaginas in the right size and shape for each woman as well as being a tissue match. They all reported normal levels of "desire, arousal, lubrication, orgasm, satisfaction" and painless intercourse. Experts said the study, published in the Lancet, was the latest example of the power of regenerative medicine. "
Harvard University and XVIVO have come together again (Previouslyw/ a commercial focus, Previouslierw/an Academic focus) to add to the growing series of scientific animations for BioVisions -- Harvard's multimedia lab in the department of Molecular and Cellular Biology. 'Protein Packing' strives to more accurately depict the molecular chaos in each and every cell, with proteins jittering around in what may seem like random motion. Proteins occupy roughly 40% of the cytoplasm, creating an environment that risks unintentional interaction and aggregation. Via diffusion and motor protein transport, these molecules are directed to sites where they are needed.
Much of this is no doubt inspired by the beautiful art and explained illustrations of David Goodsell, a biologist at Scripps who has been accurately portraying the crowdedness of the cellular landscape for a long time now.[more inside]
Scientists Progress in Quest to Grow Muscle Tissue in Labs - "The researchers are now working on optimizing the growth of human muscle tissue, including finding a way to get blood flow to the tissue, the best source of cells and the best growing medium for the cells."
Evolutionary biologists at Northumbria University have used science to figure out "attractive human dance moves" that demonstrate optimum genotypic and phenotypic health to prospective mates. "Cutting-edge motion capture technology" was used to record good and bad dancing. (Technoviking was reportedly unpleased.)
Monsanto Is Going Organic in a Quest for the Perfect Veggie - "The lettuce, peppers, and broccoli—plus a melon and an onion, with a watermelon soon to follow—aren't genetically modified at all. Monsanto created all these veggies using good old-fashioned crossbreeding, the same technology that farmers have been using to optimize crops for millennia. That doesn't mean they are low tech, exactly. Stark's division is drawing on Monsanto's accumulated scientific know-how to create vegetables that have all the advantages of genetically modified organisms without any of the Frankenfoods ick factor." [more inside]
Network Theory Overview - "The idea: nature and the world of human technology are full of networks! People like to draw diagrams of networks. Mathematical physicists know that in principle these diagrams can be understood using category theory. But why should physicists have all the fun? This is the century of understanding living systems and adapting to life on a finite planet. Math isn't the main thing we need, but it's got to be part of the solution... so one thing we should do is develop a unified and powerful theory of networks." (via ;)
The Mammoth Cometh. "Bringing extinct animals back to life is really happening — and it’s going to be very, very cool. Unless it ends up being very, very bad." [Previously, Via]
Open warfare erupts in the world of mathematical biology, as Lior Pachter of UC-Berkeley writes three blog posts attacking two papers in Nature Bioscience, accusing one of them of being "dishonest and fraudulent": The Network Nonsense of Albert-Laszlo Barabasi, The Network Nonsense of Manolo Kellis, and Why I Read the Network Nonsense Papers. Kellis (MIT) and his co-authors respond (.pdf.)
Bacteria have a Hobo Code. Next month's Science News carries a pretty interesting overview about the cutting edge of microbial science, including recent studies showing "in many mammals a microbial community ferments various sweats, oozes and excretions into distinctive scents that reveal age, health and much more to knowing noses in a select social circle". That's right, microbes are posting status updates to each other through smells, sharing with other microbes what they've learned about host animals.
"After two to three hours, the body is transformed into a sterile coffee-colored liquid the consistency of motor oil that can be safely poured down the drain, alongside a dry bone residue similar in appearance to cremated remains." GOOD magazine: The emergence of the sustainable death industry.
"My subject is a barren one – the world of nature, or in other words life; and that subject in its least elevated department, and employing either rustic terms or foreign, nay barbarian words that actually have to be introduced with an apology. Moreover, the path is not a beaten highway of authorship, nor one in which the mind is eager to range: there is not one of us who has made the same venture, nor yet one Roman who has tackled single-handed all departments of the subject."Naturalis Historia was written by Pliny the Elder between 77 and 79 CE and was meant to serve as a kind of proto-encyclopedia discussing all of the ancient knowledge available to him, covered in enough depth and breadth to make it by a reasonable margin the largest work to survive to the modern day from the Roman era. The work includes discussions on astronomy, meteorology, geography, mineralogy, zoology and botany organized along Aristotelian divisions of nature but also includes essays on human inventions and institutions. It is dedicated to the Emperor Titus in its epistle to the Emperor Vespasian, a close friend of Pliny who relied on his extensive knowledge, and its unusually careful citations of sources as well as its index makes it a precursor to modern scholarly works. It was Pliny's last work, as well as sadly his sole surviving one, and was published not long before his death attempting to save a friend from the eruption of Mt. Vesuvius that destroyed Pompeii and Herculaneum, famously recounted by Pliny's eponymous nephew Pliny the Younger.
Here is a reasonable translation that is freely available to download from archive.org for your edification.[more inside]
Recently Emily Graslie, of the fantastic natural history tumblr and youtube series TheBrainScoop, was asked a question about whether she had personally experienced sexism in her field. Her response is fucking amazing.
Inside is her goldmine of awesome female science educators online with channels that focus on Science Technology Engineering and Math. My work day is fucked.[more inside]
The Nazi Anatomists. "How the corpses of Hitler's victims are still haunting modern science—and American abortion politics."
CreatureCast - Rhizocephala - a charmingly animated look at the lifecycle of rhizocephalan barnacles, one of the more horrifying (non-charming) parasitic crustaceans (likewise). NOT a practitioner of parasitic castration but still disturbing: The bobbit worm. Happy swimming!
"Read this carefully so that you understand it. When you come home we will show you the model. Lots of love, Daddy." In 1953 Francis Crick, sat down to write his twelve-year-old son Michael a letter explaining his brand-new discovery: the double-helix structure of DNA. Now you can read the original, seven-page hand-written letter, complete with an interactive feature that lets you click for details, context and explanations. Courtesy of the Smithsonian. [more inside]
Intermeshing, rotating mechanical gears have been found in an insect. The gears act to ensure that the legs of the hopping insect move at the same rate when jumping, and are lost during molting to an adult stage. Via reddit, where the journalist is participating. Science magazine report (paywalled).
The Thoreau Poison - Caleb Crain of The New Yorker takes a closer look at the ideas explored in Upstream Color (spoilers)
British comedian Josie Long explores All the Planet's Wonders in a very short series on BBC radio: Collecting. Animals. Astronomy. Plants.
Men to Blame for Menopause: Younger Women Preferred in Human Evolutionary History. Humans are actually the only species where females cannot reproduce throughout their lives, and previous studies have suggested that there may be a "grandmother effect." This suggests that women lose their fertility at an age where they may not live to care for another child. Instead, they're available to care for younger women's children. Yet some scientists weren't satisfied with this theory. "How do you evolve infertility? It is contrary to the whole notion of natural selection" ... Original paper published in PLOS Computational Biology - Mate Choice and the Origin of Menopause [more inside]
Oliver the green moray eel loves to be petted. With small children, a fish popsicle, and commentary about barracudas. (SLYT) [more inside]
"OpenWorm is an attempt to build a complete cellular-level simulation of the nematode worm Caenorhabditis elegans. Of the 959 cells in the hermaphrodite, 302 are neurons and 95 are muscle cells. The simulation will model electrical activity in all the muscles and neurons. An integrated soft-body physics simulation will also model body movement and physical forces within the worm and from its environment." -- Bonus: explore the worm's cellular anatomy in 3D (WebGL required.)